Dataset538122_collapsed_to_symbols.538122
Phenotype538122.cls
Upregulated in classSensitive
GeneSetHP_THYROID_CARCINOMA
Enrichment Score (ES)-0.57990265
Normalized Enrichment Score (NES)-2.032365
Nominal p-value0.0
FDR q-value0.006564372
FWER p-Value0.26
Table: GSEA Results Summary



Fig 1: Enrichment plot: HP_THYROID_CARCINOMA   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1CDKN2Bcyclin dependent kinase inhibitor 2B [Source:HGNC Symbol;Acc:HGNC:1788]7460.116-0.0305No
2CASP10caspase 10 [Source:HGNC Symbol;Acc:HGNC:1500]12420.090-0.0478No
3MINPP1multiple inositol-polyphosphate phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:7102]15220.080-0.0505No
4KCNJ10potassium inwardly rectifying channel subfamily J member 10 [Source:HGNC Symbol;Acc:HGNC:6256]21980.063-0.0880No
5WRNWRN RecQ like helicase [Source:HGNC Symbol;Acc:HGNC:12791]23180.061-0.0829No
6FOXI1forkhead box I1 [Source:HGNC Symbol;Acc:HGNC:3815]23210.061-0.0687No
7CDKN1Bcyclin dependent kinase inhibitor 1B [Source:HGNC Symbol;Acc:HGNC:1785]36970.038-0.1666No
8SLC26A4solute carrier family 26 member 4 [Source:HGNC Symbol;Acc:HGNC:8818]45620.027-0.2275No
9FASLGFas ligand [Source:HGNC Symbol;Acc:HGNC:11936]56640.014-0.3099No
10MDM2MDM2 proto-oncogene [Source:HGNC Symbol;Acc:HGNC:6973]56650.014-0.3066No
11KEAP1kelch like ECH associated protein 1 [Source:HGNC Symbol;Acc:HGNC:23177]59050.011-0.3225No
12NKX2-1NK2 homeobox 1 [Source:HGNC Symbol;Acc:HGNC:11825]59300.011-0.3219No
13CDKN2Ccyclin dependent kinase inhibitor 2C [Source:HGNC Symbol;Acc:HGNC:1789]59770.010-0.3231No
14PDE11Aphosphodiesterase 11A [Source:HGNC Symbol;Acc:HGNC:8773]62560.007-0.3431No
15HABP2hyaluronan binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4798]7117-0.003-0.4093No
16CDKN1Acyclin dependent kinase inhibitor 1A [Source:HGNC Symbol;Acc:HGNC:1784]7195-0.004-0.4144No
17APCAPC regulator of WNT signaling pathway [Source:HGNC Symbol;Acc:HGNC:583]7810-0.012-0.4594No
18SDHBsuccinate dehydrogenase complex iron sulfur subunit B [Source:HGNC Symbol;Acc:HGNC:10681]8008-0.014-0.4714No
19DPF2double PHD fingers 2 [Source:HGNC Symbol;Acc:HGNC:9964]8370-0.019-0.4951No
20BMPR1Abone morphogenetic protein receptor type 1A [Source:HGNC Symbol;Acc:HGNC:1076]8412-0.019-0.4937No
21TGthyroglobulin [Source:HGNC Symbol;Acc:HGNC:11764]8611-0.022-0.5040No
22FASFas cell surface death receptor [Source:HGNC Symbol;Acc:HGNC:11920]8811-0.025-0.5136No
23SDHCsuccinate dehydrogenase complex subunit C [Source:HGNC Symbol;Acc:HGNC:10682]8843-0.025-0.5099No
24CDC73cell division cycle 73 [Source:HGNC Symbol;Acc:HGNC:16783]9100-0.029-0.5230No
25DICER1dicer 1, ribonuclease III [Source:HGNC Symbol;Acc:HGNC:17098]9387-0.034-0.5373No
26CHEK2checkpoint kinase 2 [Source:HGNC Symbol;Acc:HGNC:16627]9562-0.036-0.5422No
27SDHDsuccinate dehydrogenase complex subunit D [Source:HGNC Symbol;Acc:HGNC:10683]9641-0.038-0.5393No
28RETret proto-oncogene [Source:HGNC Symbol;Acc:HGNC:9967]9722-0.039-0.5363No
29GREM1gremlin 1, DAN family BMP antagonist [Source:HGNC Symbol;Acc:HGNC:2001]10168-0.048-0.5595No
30PRKCDprotein kinase C delta [Source:HGNC Symbol;Acc:HGNC:9399]10345-0.052-0.5610No
31FLCNfolliculin [Source:HGNC Symbol;Acc:HGNC:27310]10358-0.052-0.5496No
32RASGRP1RAS guanyl releasing protein 1 [Source:HGNC Symbol;Acc:HGNC:9878]10748-0.062-0.5652Yes
33HRASHRas proto-oncogene, GTPase [Source:HGNC Symbol;Acc:HGNC:5173]10763-0.063-0.5514Yes
34SOX4SRY-box transcription factor 4 [Source:HGNC Symbol;Acc:HGNC:11200]10847-0.065-0.5424Yes
35SMARCC2SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2 [Source:HGNC Symbol;Acc:HGNC:11105]10864-0.066-0.5280Yes
36PTENphosphatase and tensin homolog [Source:HGNC Symbol;Acc:HGNC:9588]10906-0.068-0.5152Yes
37AKT1AKT serine/threonine kinase 1 [Source:HGNC Symbol;Acc:HGNC:391]11175-0.076-0.5180Yes
38SEC23BSEC23 homolog B, COPII coat complex component [Source:HGNC Symbol;Acc:HGNC:10702]11564-0.092-0.5263Yes
39MEN1menin 1 [Source:HGNC Symbol;Acc:HGNC:7010]11640-0.096-0.5094Yes
40SMARCD1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:HGNC Symbol;Acc:HGNC:11106]11662-0.097-0.4880Yes
41SMARCA4SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]12099-0.122-0.4929Yes
42ARID1AAT-rich interaction domain 1A [Source:HGNC Symbol;Acc:HGNC:11110]12296-0.139-0.4752Yes
43PRKAR1Aprotein kinase cAMP-dependent type I regulatory subunit alpha [Source:HGNC Symbol;Acc:HGNC:9388]12375-0.150-0.4457Yes
44FOXE1forkhead box E1 [Source:HGNC Symbol;Acc:HGNC:3806]12498-0.165-0.4161Yes
45SMARCE1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:HGNC Symbol;Acc:HGNC:11109]12505-0.166-0.3774Yes
46PIK3CAphosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha [Source:HGNC Symbol;Acc:HGNC:8975]12561-0.174-0.3405Yes
47SOX11SRY-box transcription factor 11 [Source:HGNC Symbol;Acc:HGNC:11191]12627-0.185-0.3019Yes
48TP53tumor protein p53 [Source:HGNC Symbol;Acc:HGNC:11998]12742-0.220-0.2586Yes
49JAG1jagged canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:6188]12799-0.252-0.2034Yes
50SMARCB1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 [Source:HGNC Symbol;Acc:HGNC:11103]12801-0.252-0.1437Yes
51NRASNRAS proto-oncogene, GTPase [Source:HGNC Symbol;Acc:HGNC:7989]12824-0.273-0.0809Yes
52CDKN2Acyclin dependent kinase inhibitor 2A [Source:HGNC Symbol;Acc:HGNC:1787]12889-0.3680.0012Yes
Table: GSEA details [plain text format]



Fig 2: HP_THYROID_CARCINOMA   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HP_THYROID_CARCINOMA: Random ES distribution   
Gene set null distribution of ES for HP_THYROID_CARCINOMA